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34 lines
1.3 KiB
Python
34 lines
1.3 KiB
Python
# Copyright (c) Alibaba, Inc. and its affiliates.
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import unittest
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from modelscope.hub.snapshot_download import snapshot_download
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from modelscope.pipelines import pipeline
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from modelscope.utils.constant import Tasks
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from modelscope.utils.test_utils import test_level
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class UnifoldProteinStructureTest(unittest.TestCase):
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def setUp(self) -> None:
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self.task = Tasks.protein_structure
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self.model_id = 'DPTech/uni-fold-monomer'
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self.model_id_multimer = 'DPTech/uni-fold-multimer'
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self.protein = 'MGLPKKALKESQLQFLTAGTAVSDSSHQTYKVSFIENGVIKNAFYKKLDPKNHYPELLAKISVAVSLFKRIFQGRRSAEERLVFDD'
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self.protein_multimer = 'GAMGLPEEPSSPQESTLKALSLYEAHLSSYIMYLQTFLVKTKQKVNNKNYPEFTLFDTSKLKKDQTLKSIKT' + \
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'NIAALKNHIDKIKPIAMQIYKKYSKNIP NIAALKNHIDKIKPIAMQIYKKYSKNIP'
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@unittest.skipUnless(test_level() >= 1, 'skip test in current test level')
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def test_run_by_direct_model_download(self):
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model_dir1 = snapshot_download(self.model_id_multimer)
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multi_pipeline_ins = pipeline(task=self.task, model=model_dir1)
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_ = multi_pipeline_ins(self.protein_multimer)
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model_dir = snapshot_download(self.model_id)
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mono_pipeline_ins = pipeline(task=self.task, model=model_dir)
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_ = mono_pipeline_ins(self.protein)
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if __name__ == '__main__':
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unittest.main()
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