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Releases 0.38.0 through 0.38.25 recorded the ENV file migration and deliberately left the file at the old path, so 0.38.26 treating a leftover file as a hand-edit replayed the environment as it stood at that upgrade over every `config:set` and `config:unset` made since, reinstating variables and secrets that had been deliberately unset. A file found at the old path once its migration is on record is no longer imported: it is removed when it agrees with the current config, and is otherwise moved aside to `ENV.migrated` with the keys it disagrees on named in a warning. That warning now reaches the operator during an upgrade rather than being swallowed, which is why the overwrite went unreported.