diff --git a/apps/server/src/jobs/node-clean.ts b/apps/server/src/jobs/node-clean.ts
index 44f67fa0..a7837024 100644
--- a/apps/server/src/jobs/node-clean.ts
+++ b/apps/server/src/jobs/node-clean.ts
@@ -1,6 +1,8 @@
+import { getIdType, IdType } from '@colanode/core';
 import { database } from '@colanode/server/data/database';
 import { CreateNodeTombstone } from '@colanode/server/data/schema';
 import { JobHandler } from '@colanode/server/jobs';
+import { updateDocument } from '@colanode/server/lib/documents';
 import { eventBus } from '@colanode/server/lib/event-bus';
 import { deleteFile } from '@colanode/server/lib/files';
 import { createLogger } from '@colanode/server/lib/logger';
@@ -11,6 +13,7 @@ const logger = createLogger('server:job:clean-node-data');
 export type NodeCleanInput = {
   type: 'node.clean';
   nodeId: string;
+  parentId: string | null;
   workspaceId: string;
   userId: string;
 };
@@ -29,6 +32,10 @@ export const nodeCleanHandler: JobHandler<NodeCleanInput> = async (input) => {
   await cleanNodeRelations([input.nodeId]);
   await cleanNodeFiles([input.nodeId]);
 
+  if (input.parentId) {
+    await cleanNodeFromDocument(input);
+  }
+
   let hasMore = true;
   while (hasMore) {
     const children = await database
@@ -164,3 +171,28 @@ const cleanNodeFiles = async (nodeIds: string[]) => {
       .execute();
   }
 };
+
+const cleanNodeFromDocument = async (input: NodeCleanInput) => {
+  if (!input.parentId) {
+    return;
+  }
+
+  const parentIdType = getIdType(input.parentId);
+  if (parentIdType !== IdType.Page && parentIdType !== IdType.Record) {
+    return;
+  }
+
+  await updateDocument({
+    documentId: input.parentId,
+    userId: input.userId,
+    workspaceId: input.workspaceId,
+    updater: (content) => {
+      if (!content.blocks[input.nodeId]) {
+        return content;
+      }
+
+      delete content.blocks[input.nodeId];
+      return content;
+    },
+  });
+};
diff --git a/apps/server/src/lib/documents.ts b/apps/server/src/lib/documents.ts
index 89829e4a..285c81b1 100644
--- a/apps/server/src/lib/documents.ts
+++ b/apps/server/src/lib/documents.ts
@@ -1,3 +1,5 @@
+import { cloneDeep } from 'lodash-es';
+
 import {
   CanUpdateDocumentContext,
   DocumentContent,
@@ -17,6 +19,7 @@ import { fetchNode, fetchNodeTree, mapNode } from '@colanode/server/lib/nodes';
 import {
   CreateDocumentInput,
   CreateDocumentOutput,
+  UpdateDocumentInput,
 } from '@colanode/server/types/documents';
 import { ConcurrentUpdateResult } from '@colanode/server/types/nodes';
 
@@ -286,3 +289,148 @@ const tryUpdateDocumentFromMutation = async (
     return { type: 'retry' };
   }
 };
+
+export const updateDocument = async (
+  input: UpdateDocumentInput
+): Promise<boolean> => {
+  for (let count = 0; count < UPDATE_RETRIES_LIMIT; count++) {
+    const result = await tryUpdateDocument(input);
+
+    if (result.type === 'success') {
+      return true;
+    }
+
+    if (result.type === 'error') {
+      return false;
+    }
+  }
+
+  return false;
+};
+
+const tryUpdateDocument = async (
+  input: UpdateDocumentInput
+): Promise<ConcurrentUpdateResult<boolean>> => {
+  const node = await fetchNode(input.documentId);
+  if (!node) {
+    return { type: 'error', error: 'Node not found' };
+  }
+
+  const model = getNodeModel(node.type);
+  if (!model.documentSchema) {
+    return { type: 'error', error: 'Node does not support documents' };
+  }
+
+  const documentUpdates = await database
+    .selectFrom('document_updates')
+    .where('document_id', '=', input.documentId)
+    .selectAll()
+    .execute();
+
+  const ydoc = new YDoc();
+  for (const update of documentUpdates) {
+    ydoc.applyUpdate(update.data);
+  }
+
+  const currentContent = ydoc.getObject<DocumentContent>();
+  const updatedContent = input.updater(cloneDeep(currentContent));
+  if (!updatedContent) {
+    return { type: 'error', error: 'Failed to update document' };
+  }
+
+  const update = ydoc.update(model.documentSchema, updatedContent);
+  if (!update) {
+    return { type: 'error', error: 'Failed to create document update' };
+  }
+
+  const content = ydoc.getObject<DocumentContent>();
+
+  if (!model.documentSchema.safeParse(content).success) {
+    return { type: 'error', error: 'Updated content is invalid' };
+  }
+
+  const date = new Date();
+  const updateId = generateId(IdType.Update);
+
+  try {
+    const { updatedDocument, createdDocumentUpdate } = await database
+      .transaction()
+      .execute(async (trx) => {
+        const createdDocumentUpdate = await trx
+          .insertInto('document_updates')
+          .returningAll()
+          .values({
+            id: updateId,
+            document_id: input.documentId,
+            root_id: node.root_id,
+            workspace_id: input.workspaceId,
+            data: update,
+            created_at: date,
+            created_by: input.userId,
+            merged_updates: null,
+          })
+          .executeTakeFirst();
+
+        if (!createdDocumentUpdate) {
+          throw new Error('Failed to create document update');
+        }
+
+        const updatedDocument = await trx
+          .insertInto('documents')
+          .returningAll()
+          .values({
+            id: input.documentId,
+            workspace_id: input.workspaceId,
+            content: JSON.stringify(content),
+            created_at: date,
+            created_by: input.userId,
+            revision: createdDocumentUpdate.revision,
+          })
+          .onConflict((cb) =>
+            cb.column('id').doUpdateSet({
+              content: JSON.stringify(content),
+              updated_at: date,
+              updated_by: input.userId,
+              revision: createdDocumentUpdate.revision,
+            })
+          )
+          .executeTakeFirst();
+
+        if (!updatedDocument) {
+          throw new Error('Failed to update document');
+        }
+
+        return {
+          updatedDocument,
+          createdDocumentUpdate,
+        };
+      });
+
+    if (!updatedDocument || !createdDocumentUpdate) {
+      throw new Error('Failed to update document');
+    }
+
+    eventBus.publish({
+      type: 'document.updated',
+      documentId: input.documentId,
+      workspaceId: input.workspaceId,
+    });
+
+    eventBus.publish({
+      type: 'document.update.created',
+      documentId: input.documentId,
+      rootId: node.root_id,
+      workspaceId: input.workspaceId,
+    });
+
+    await scheduleDocumentEmbedding(input.documentId);
+
+    return {
+      type: 'success',
+      output: true,
+    };
+  } catch (error) {
+    logger.error(error, `Failed to update document`);
+    return { type: 'retry' };
+  }
+};
diff --git a/apps/server/src/lib/nodes.ts b/apps/server/src/lib/nodes.ts
index 8d51228f..a7d5a75a 100644
--- a/apps/server/src/lib/nodes.ts
+++ b/apps/server/src/lib/nodes.ts
@@ -730,6 +730,7 @@ export const deleteNodeFromMutation = async (
   await jobService.addJob({
     type: 'node.clean',
     nodeId: mutation.nodeId,
+    parentId: node.parent_id,
     workspaceId: user.workspace_id,
     userId: user.id,
   });
diff --git a/apps/server/src/types/documents.ts b/apps/server/src/types/documents.ts
index 9bf2adeb..e3f9394a 100644
--- a/apps/server/src/types/documents.ts
+++ b/apps/server/src/types/documents.ts
@@ -11,3 +11,10 @@ export type CreateDocumentInput = {
 export type CreateDocumentOutput = {
   document: SelectDocument;
 };
+
+export type UpdateDocumentInput = {
+  documentId: string;
+  userId: string;
+  workspaceId: string;
+  updater: (content: DocumentContent) => DocumentContent | null;
+};